Hi FreeSurfer folks,
we are about to process about 120 images with FS v5.1 and stand in front
of a decision whether to do manual intervention or use the results from
fully-automated FS run.
We intend to use the volume, thickness, area, curvature measures of
subcortical and cortical regions and were hoping to receive some advice
on this dilemma: /to edit / or/not to edit/?
Our data is decent quality, of healthy children (6-9 years old) and
adults, acquired on 3T GE scanner, FSPGR sequence, with TI=400ms,
TR=8.5ms, TE=3.4ms, flip angle=15deg, resolution 0.86 x 0.86 x 1.2mm,
one scan per subject.
I understand that visual inspection of the results is necessary in
either case. If there were gross errors detected, would you advise to
exclude the subject from analysis or rather do manual editing on these
subjects that need it?
Any and all thoughts or comments that could help us with the decision
are most appreciated!
Thank you!
Miro Drahos
http://brainlens.org
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