In general the FSLDIR variable needs to be set up for freesurfer scripts
to find FSL executables. Others on the list will be more qualified than me
to address the VM aspects of this.
On Tue, 5 Feb 2013, Varghese Chikku wrote:
Hi Anastasia,
First of all,thanks for your mail and forgive my ignorance again.
I have now downloaded FSL on VMplayer I also have FS running on Oracle
VM.So my question is if I run dti_recon,will freesurfer automatically
detect FSL,which is running on a different VM.-
Many thanks for your help,
Chikku
On 4 February 2013 16:39, Anastasia Yendiki <ayend...@nmr.mgh.harvard.edu>
wrote:
Yes.
On Mon, 4 Feb 2013, Varghese Chikku wrote:
Dear Team,
I tried to run dt_recon and the systems
says cannot find
eddy_correct,Make sure FSL is installed. So ,do I
need to install the
whole FSL package to run this.
In Thanks
Chikku
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