No one ever encountered this kind of full path problem? recon-all works fine, but recon-all -qcache stopped because of this kind of problem.
Any hint would be appreciated. Xiaowei On Wed, Feb 20, 2013 at 5:07 PM, Xiaowei Song <dawnwei.s...@gmail.com>wrote: > Dear Bruce and freesurfer experts, > > I am trying to use mri_average_subjects, but encountered the error: > mghRead(/fullpath/surf/lh.inflated.H, -1): could not open file. > . > > Then I tried > mri_info subject/surf/lh.inflated.H > , and it worked. > > But when I tried > mri_info $(readlink -f subject/surf/lh.inflated.H) > , the same error information is told. > > Besides, I tried the same command to the downloaded buckner_data and no > error happened. > > How to fix this? > > > The following information is from bugr: > FREESURFER_HOME: /usr/local/freesurfer > Build stamp: freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 > RedHat release: Red Hat Enterprise Linux Server release 6.3 (Santiago) > Kernel info: Linux 2.6.32-279.22.1.el6.x86_64 x86_64 > > > Thanks > > -- > Xiaowei Song > -- Xiaowei Song
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