Hi Gonzalo, each of those commands has a --help flag which causes it to print out documentation. Have you looked at that yet? doug On 02/28/2013 01:20 PM, Gonzalo Rojas Costa wrote: > Hi: > > I need to compute the GM and WM volume for each lobe... I know that > for GM, I must use: > > mri_annotation2label --subject bert --hemi rh --lobesStrict lobesfile > > mris_anatomical_stats -mgz -cortex ../label/lh.cortex.label -f > ../stats/lh.lobesfile.stats -b -a ../label/lh.lobesfile.annot bert lh > white > > And, for WM I know that I must use the commands: mri_aparc2aseg and > mri_segstats, but I don't know the options of each command that I must > use... Could you please send me the complete commands for WM?... > > Sincerely, > > > -- > Gonzalo Rojas Costa > Laboratory for Advanced Medical Image Processing > Department of Radiology > Clínica las Condes > Lo Fontecilla 441, Las Condes, Santiago, Chile. > Tel: 56-2-2105170 > Cel: 56-9-97771785 > www.clc.cl > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >
-- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
