Hi, After upgrading to FreeSurfer 5.2.0, the command with "-subcortseg" flag exited with the following error.
MRISread(/usr/local/freesurfer/5.2.0/dist/subjects/test/surf/lh.white): could not open file I confirmed that the "-autorecon1" stage finished without error. In v5.1.0 it worked fine, so I'm wondering if there is any change in mri_segstats?? FYI, I have attached the last part of recon-all.log file. Thanks for your help. Akio
recon-all.log
Description: Binary data
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