Dear Freesurfers, I'm new and I'm starting using Freesurfer. I'm having a problem with one subject, during the cortical reconstruction (recon-all) the process stops at this stage:
mri_cc <http://surfer.nmr.mgh.harvard.edu/fswiki/mri_cc> -aseg aseg.auto_noCCseg.mgz -o aseg.auto.mgz <subjid> at this point: final transformation (x=128.0, yr=0.978, zr=0.153): 1.000 -0.003 0.017 -1.456; 0.003 1.000 0.000 8.654; -0.017 0.000 1.000 25.201; 0.000 0.000 0.000 1.000; without giving me any error message, it just stops. Do you have some ideas for why it happens? thanks to everyone, Claudia
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