Hi Bruce,
In fact, have 2 differents surfaces of pial surface. I would like to save my
surfaces in volume to be able to calculate the dice score between the two.
Cheers
Lucille
________________________________
De : Bruce Fischl <fis...@nmr.mgh.harvard.edu>
À : Lucille Deroche <lucilledero...@yahoo.fr>
Cc : "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu>
Envoyé le : Jeudi 11 avril 2013 11h18
Objet : Re: [Freesurfer] Autoreg-sess and mri_surf2vol
Hi Lucille
what do you mean by converting a surface to the volume? What do you want
to do with it? What volume would you like to convert it to?
cheers
Bruce
On Thu, 11 Apr
2013, Lucille Deroche wrote:
> Hi,
> My name is Lucille and I'm really new with Freesurfer : My questions are
> very basic, sorry.
> I just start a project in segmentation of cerebrum.
> For converting a surface in volume. I would like to use mri_surf2vol but for
> that I need a
> volume registration file . For creating that file, I would use autoreg-sess.
> In documentation, it is said that : 'The volume registration file contains
> the matrix that
> maps XYZ in the reference anatomical to XYZ in the functional volume'
> My question is : what here, represent the anatomical reference ? The
> functionnal volume ?
> Secondly, for autoreg-sess, the arguments are the subject name and the
> subject directory. I
> think the registration I need to create must be between my 2 volumes, so
> should I use the
> subject name and subject directory for my 2 subjects ?
>
> Sorry,I am really messed...
>
> Cheers
> Lucille
>
>
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
