Hi Anna

what command line did you run?
Bruce
On Thu, 2 May 2013, Anna Deferia wrote:

Hello FreeSurfer,
I have tried adding control points and running recon for the control points
multiple times but no changes to the volume are made. Does anyone know what
I could be doing wrong?

Thank you,

Anna




On Thu, May 2, 2013 at 2:16 PM, Gonzalo Rojas Costa
<gonzalo.rojas.co...@gmail.com> wrote:
      Hi Bruce:

        I tested 4.5 and 5.1 versions... with the first I processed
      complete, and with 5.1 only autorecon1 section...

        Sincerely,


      Gonzalo Rojas Costa


      On Thu, May 2, 2013 at 1:31 PM, Bruce Fischl
      <fis...@nmr.mgh.harvard.edu> wrote:
      > what version are you running? The newer ones are *much* better
      at this
      > Bruce
      >
      > On Thu, 2 May 2013, Gonzalo Rojas Costa wrote:
      >
      >> Hi:
      >>
      >>  I has the MPRAGE of a patient with one big ventricle, and
      the other
      >> has normal shape and size... Any tip and tricks to process it
      ?...
      >> Because freesurfer fails from the beggining of the process
      (VERY BAD
      >> talairach registration)... I test -bigventricle option of
      recon-all,
      >> but I got the same problems...
      >>
      >>  Sincerely,
      >>
      >> --
      >> Gonzalo Rojas Costa
      >> Laboratory for Advanced Medical Image Processing
      >> Department of Radiology
      >> Clínica las Condes
      >> Lo Fontecilla 441, Las Condes, Santiago, Chile.
      >> Tel: 56-2-2105170
      >> Cel: 56-9-97771785
      >> www.clc.cl
      >>
      >> _______________________________________________
      >> Freesurfer mailing list
      >> Freesurfer@nmr.mgh.harvard.edu
      >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
      >>
      >>
      >>
      >
      >
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--
Gonzalo Rojas Costa
Laboratory for Advanced Medical Image Processing
Department of Radiology
Clínica las Condes
Lo Fontecilla 441, Las Condes, Santiago, Chile.
Tel: 56-2-2105170
Cel: 56-9-97771785
www.clc.cl

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