Hi Maria if the brain wraps from back to front then it can't be recovered. Nothing to do with the analysis - the imaging data itself is corrupted.
sorry Bruce On Thu, 6 Jun 2013, Maria Kharitonova wrote: > Hello, > > We have a relatively small FOV in our study because we mostly scan kids. > Sometimes we scan adults with the same protocol, though, and after looking > through the adults' reconned brains, I've noticed wrap-around on some brains. > For one subject it's particularly bad; it affects aparc labels, where the > very back of the brain gets labeled as orbitofrontal cortex. Is there a way > to remedy this (other than increasing the FOV for subsequent subjects)? E.g. > manually relabeling the affected regions? > > I'm pretty new to FreeSurfer, so I apologize in advance if this questions is > naive. > > Thanks! > > Maria Kharitonova, Ph.D. > Postdoctoral Research Fellow > Laboratories of Cognitive Neuroscience > Boston Children's Hospital > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
