Hi Gari
you can certainly do this with mri_vol2vol. You can try mri_convert, I
think it reads .dat files, but vol2vol definitely does
cheers
Bruce
On Mon, 1 Jul 2013,
Garikoitz Lerma-Usabiaga wrote:
Hi again,
is it possible to use mri_convert with a register.dat to create a .mgh
volume in the registered space?
any help would be appreciated...
thanks!
Gari
On Mon, Jul 1, 2013 at 8:45 PM, Garikoitz Lerma-Usabiaga
<gariko...@gmail.com> wrote:
Hi,I want to obtain volume statistics from a ROI in fsaverage.
I have register.dat and a .nii file (the ROI), but I don't now how to
get to the .label.
The last try has been:
mri_vol2vol --mov $SUBJECTS_DIR/fsaverage/label/ROI.nii
--o $SUBJECTS_DIR/fsaverage/label/ROI.mgh
--reg$SUBJECTS_DIR/fsaverage/mri/transforms/my_own_register_created_with_bbregis
ter.dat --targ fsaverage
(but it is failing, error:
corRead(): can't open file $SUBJECTS_DIR/fsaverage/COR-.info)
My next steps were:
cor2label (in fsaverage)
mri_label2label (per every subject)
mri_segstats (per every subject)
Is there any simpler method to accomplish the same? Or at least that
it works?
many thanks,
Gari
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