Hi Cararina,

sorry, I don't think we have anything to do this in matlab. You could 
write a tcl script to do it automatically in tksurfer and call that from 
inside matlab I guess.

cheers
Bruce
On Tue, 9 Jul 2013, Catarina Rua wrote:

>
> Dear freesurfer admin,
>
> I'm writing a piece of code in matlab based on freesurfer reconstructed 
> brains generating series of labels to an annotation file.
> However, I wanted to include a process similar to the existing in tksurfer 
> options in the 'custom fill' where you can fill in all vertices up to a label 
> border/up to included paths.
> I have searched on the web for a piece of matlab code that would process 
> this, but I coulnt seem to find it.
> Is there any quick way to do this?
>
> The basic idea is that I have a group of non-labeled vertices enclosed within 
> a label, and I just want to 'fill" them with the same label as the label that 
> surrounds it.
>
> Thank you very much in advance.
> I really do hope this can be possible!
> Cheers!
> Catarina Rua
>
>
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