Ok thank you, I'll analyse them separately.
On Wed, Jul 10, 2013 at 6:33 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu>wrote: > Hi Bianca, it is not currently possible to this since it expects to have > one cycle duration. You can analyze them separately, then create a field > sign map outside of the regular stream. > > doug > > > On 07/10/2013 10:58 AM, Bianca van Kemenade wrote: > > Dear Freesurfers, > > > > When I only had 3 runs of polar angle data for retinotopic mapping, I > > used for example this command to make the analysis: > > > > mkanalysis-sess -a rtopy.self.lh -surface self lh -TR 2 -retinotopy 12 > > -paradigm rtopy.par -fwhm 5 -fsd bold > > > > For some new subjects I have 3 runs of polar angle mapping and 3 runs > > of eccentricity mapping, with different parameters (cycle duration > > differs). Is it possible to analyse polar angle and eccentricity in > > one go? If so, what do I put under the -retinotopy flag? > > > > Thanks, > > Bianca > > > > -- > > Bianca van Kemenade, MSc > > Doctoral Candidate, Berlin School of Mind and Brain > > > > Klinik für Psychiatrie und Psychotherapie > > Campus Charité Mitte > > Charitéplatz 1 > > 10117 Berlin > > http://www.mind-and-brain.de/ > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > -- Bianca van Kemenade, MSc Doctoral Candidate, Berlin School of Mind and Brain Klinik für Psychiatrie und Psychotherapie Campus Charité Mitte Charitéplatz 1 10117 Berlin http://www.mind-and-brain.de/
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