Hi Freesurfers (Lilla), I'm running v5.1.0 on a Mac trying to apply a cvs morph via the following function:
mri_vol2vol --targ cvs_avg35_inMNI152 --m3z $SUBJECTS_DIR/NC001/cvs_avg35_inMNI152/combined_tocvs_avg35_inMNI152_elreg_afteraseg-norm.m3z --noDefM3zPath --mov $SUBJECTS_DIR/NC001/labels/lh.hipp.nii.gz --o $SUBJECTS_DIR/NC001/labels2cvs/lh.hipp2cvsMNI152.nii.gz --interp nearest --no-save-reg Using the m3z file as it is; no assumed location. movvol /media/users/barrond/NYU/Freesurfer/NC001/labels/lh.hipp.nii.gz targvol cvs_avg35_inMNI152 outvol /media/users/barrond/NYU/Freesurfer/NC001/labels2cvs/lh.hipp2cvsMNI152.nii.gz invert 0 tal 0 talres 2 regheader 0 noresample 0 interp nearest (0) precision float (3) Gdiag_no -1 Morphing InvertMorph 0 Synth 0 SynthSeed 1375994175 corRead(): can't open file /media/users/barrond/NYU/Freesurfer/cvs_avg35_inMNI152/COR-.info I don't know what "COR-.info" is or how to make it. Could someone please point me in the right direction? Cheers, Daniel _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
