---------- Forwarded message ---------- From: Yunxin Wang <yunxinw...@gmail.com> Date: 2013/8/6 Subject: Re: [Freesurfer] How to transfer a reconstructed pial surface file into a 256*256*256 matlab matrix file? To: Bruce Fischl <fis...@nmr.mgh.harvard.edu>
Hi Bruce, Thanks for your response. Actually I want to use the fast marching toolbox to further analyze the pial surface that FreeSurfer has reconstructed automatically, but according to the procedure only the pial surface will be used for fast marching process and I found out the input file of fast marching is a 256*256*256 matlab file which I could just load in matlab but couldn't see any detail. Do you think I can use the *freesurfer_read_surf*function in matlab to transfer the surface? Best, Yunxin 2013/8/5 Bruce Fischl <fis...@nmr.mgh.harvard.edu> > Hi Yunxin > > the surface lives in a continuum and is 2D. Do you mean filling the space > between the ?h.white and ?h.pial surfaces? We do that as part of recon-all > and create ribbon volumes in the mri dir > cheers > Bruce > > > > On Mon, 5 Aug 2013, Yunxin Wang wrote: > > Hi dear all, >> I'm new here and I've a simple question that how could I transfer the >> reconstructed pial surface file(like lh.pial) into a >> 256*256*256 matlab matrix used in later fast marching process? >> >> Any suggestion will be appreciated! >> Thank guys. >> >> Best, >> Yunxin Wang >> >> >> >> >> > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/**complianceline<http://www.partners.org/complianceline>. > If the e-mail was sent to you in error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
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