If you have 5.3, you run
recon-all -s subject -cortparc -parcstats
will update just the aparc annotation and the corresponding stats files
doug
On 9/17/13 4:49 PM, Gomar, Jesus wrote:
Dear Freesurfer experts,
I hope someone can help me with a couple of questions regarding the
use of mris_anatomical_stats command:
1. I am using mris_anatomical_stats to compute perirhinal thickness
but with subjects I had previously recon through v5.1.0, and of course
the mris_anatomical_stas failed because there is no perirhinal label.
Is there a shorcut to compute perirhinal thickness without re-runnig
recon-all again with v5.2.0/5.3.0?
2. When using mris_anatomical_stats, Can I compute measures for a list
of subjects using something similar to --subjectsfile? It doesn't say
so in the --help, but I thought perhaps there might be a way.
Thank you very much!
Jesus
The information contained in this electronic e-mail transmission and
any attachments are intended only for the use of the individual or
entity to whom or to which it is addressed, and may contain
information that is privileged, confidential and exempt from
disclosure under applicable law. If the reader of this communication
is not the intended recipient, or the employee or agent responsible
for delivering this communication to the intended recipient, you are
hereby notified that any dissemination, distribution, copying or
disclosure of this communication and any attachment is strictly
prohibited. If you have received this transmission in error, please
notify the sender immediately by telephone and electronic mail, and
delete the original communication and any attachment from any
computer, server or other electronic recording or storage device or
medium. Receipt by anyone other than the intended recipient is not a
waiver of any attorney-client, physician-patient or other privilege.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
