You should be fine if the surfaces aren't affected by the remaining skull
Bruce
On Wed, 23 Oct 2013, Subhabrata Chaudhury wrote:

Hi Everyone,
 
I have some data where the skull striping hasnt worked properly and there are 
some skull remaining.
However, upon looking at the white and pial surfaces, those look perfectly 
fine. My question is will the
erroneous skullstriping affect the supratentorial volume estimation ? 
I will be highly obliged if someone can address this concern. 
 
Regards
 
Subha

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