yes, you can add control points to the white matter if that's what's
going on
Bruce
On Wed, 30 Oct 2013, Ashley Hannah wrote:
Can this be manually corrected?
On Wed, Oct 30, 2013 at 2:19 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu>
wrote:
looks like a pretty severe bias field may be the source of much
of your problems (plus some motion artifact)
On Wed, 30 Oct 2013, Ashley Hannah wrote:
Here are the tkmedit with overlay images.
Thank you for your help!
Ashley
On Wed, Oct 30, 2013 at 12:40 PM, Bruce Fischl
<fis...@nmr.mgh.harvard.edu>
wrote:
It's hard to tell anything from those images.
We need to see
surfaces over volumes in freeview or tkmedit
Cheers
Bruce
On Oct 30, 2013, at 12:01 PM, Ashley Hannah
<ahannah1...@gmail.com>
wrote:
For some reason the images will not display.
Hopefully this works....
On Wed, Oct 30, 2013 at 11:31 AM, Bruce Fischl
<fis...@nmr.mgh.harvard.edu> wrote:
Hi Ashley
if you upload a dataset we'll take a look. I
am
surprised to hear that you are having
problems. Can
you post an example image?
Bruce
On Wed, 30 Oct 2013, Ashley Hannah wrote:
Hello,
Has anyone processed a SAG FSPGR BRAVO
sequence successfully through
FreeSurfer?
When I run these images the program
finishes without error however the
output in tksurfer is grossly
incorrect.
Is there a way to adjust the parameters
for reading white and gray matter by
freesurfer (because BRAVO has a
different contrast, not as defined) so
that
regions and boundaries are parceled
correctly?
Thanks,
--
Ashley
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<SAGBravo2_07.png>
<SAGBravo1_07.png>
--
Ashley
--
Ashley M. Hannah
Doctoral Student
Neuroscience Program
Michigan State University
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