Just run: source /usr/local/freesurfer/nmr-dev-env > On May 6, 2014, at 10:34 AM, "[email protected]" > <[email protected]> wrote: > > I have not tried dev version. Can you please let me know how I can load that? > >> Have you tried dev version? >> >> On May 6, 2014, at 10:15 AM, "[email protected]" >> <[email protected]> wrote: >> >>> Hello All, >>> >>> Any idea why freeview fails to open? Below I have included the terminal >>> output. >>> >>> I have checked my quota and I have plenty of available memory. I also >>> tried running the 2 options (-start_in_debugger and >>> -on_error_attach_debugger), but these were not recognized. I was next >>> going to attempt to configure, but I fear I may do more damage if I >>> start >>> messing around with cmds that I do not understand. >>> >>> Thank you for the assistance! >>> >>> Jacob >>> >>> >>> [purkinje:mri] (nmr-stable53-env) freeview >>> [0]PETSC ERROR: >>> ------------------------------------------------------------------------ >>> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>> probably memory access out of range >>> [0]PETSC ERROR: Try option -start_in_debugger or >>> -on_error_attach_debugger >>> [0]PETSC ERROR: or see >>> http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#Signal[0]PETSC >>> ERROR: or try http://valgrind.org on linux or man libgmalloc on Apple to >>> find memory corruption errors >>> [0]PETSC ERROR: configure using --with-debugging=yes, recompile, link, >>> and >>> run >>> [0]PETSC ERROR: to get more information on the crash. >>> [0]PETSC ERROR: --------------------- Error Message >>> ------------------------------------ >>> [0]PETSC ERROR: Signal received! >>> [0]PETSC ERROR: >>> ------------------------------------------------------------------------ >>> [0]PETSC ERROR: Petsc Release Version 2.3.3, Patch 13, Thu May 15 >>> 17:29:26 >>> CDT 2008 HG revision: 4466c6289a0922df26e20626fd4a0b4dd03c8124 >>> [0]PETSC ERROR: See docs/changes/index.html for recent updates. >>> [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting. >>> [0]PETSC ERROR: See docs/index.html for manual pages. >>> [0]PETSC ERROR: >>> ------------------------------------------------------------------------ >>> [0]PETSC ERROR: Unknown Name on a linux-gnu named >>> purkinje.nmr.mgh.harvard.edu by jacobml Tue May 6 10:07:13 2014 >>> [0]PETSC ERROR: Libraries linked from >>> /autofs/space/lyon_006/pubsw/Linux2-2.3-x86_64/packages/petsc/2.3.3-p13/src/petsc-2.3.3-p13/lib/linux-gnu-c-opt >>> [0]PETSC ERROR: Configure run at Tue Aug 10 15:01:59 2010 >>> [0]PETSC ERROR: Configure options --with-debugging=no --with-cc=gcc >>> --with-fc=g77 --download-f-blas-lapack=0 --download-mpich=1 --with-mpi=1 >>> --with-x=0 --with-gnu-copyright-code=0 --with-shared=0 COPTFLAGS=-O3 >>> CXXOPTFLAGS=-O3 FOPTFLAGS=-O3 >>> [0]PETSC ERROR: >>> ------------------------------------------------------------------------ >>> [0]PETSC ERROR: User provided function() line 0 in unknown directory >>> unknown file >>> [unset]: aborting job: >>> application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0 >>> _______________________________________________ >>> Freesurfer mailing list >>> [email protected] >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> _______________________________________________ >> Freesurfer mailing list >> [email protected] >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >
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