mostly right, a few corrections below On 05/21/2014 10:35 AM, Buse Merve Ürgen wrote: > Dear all, > I want to get the measurements of meancurvature, thickness, white > matter volume and gray matter volume based on Desikan-Killiay Atlas. > I would like to learn whether the commands I used to get them are the > correct ones (in terms of content) & for Desikan Killiany atlas? > > *For meancurv: * > aparcstats2table --hemi lh --subjects S1 S2 S3 --parc aparc --meas > meancurv -t lh.parc.meancurv.txt --parc=aparc > > *For thickness:* > aparcstats2table --hemi rh --subjects S1 S2 S3 --parc aparc --meas > meancurv -t rh.parc.meancurv.txt Use--parc=aparc --meas thickness -t rh.parc.thickness.txt > > *For WM volume:* > asegstats2table --all-segs --subjects S1 S2 S3 \-t table.wmparc.txt -d > space --stats wmparc.stats > > *For GM volume:* > aparcstats2table --subjects S1 S2 S3 --hemi lh --meas > volume--parc=aparc --tablefile aparc_lh_volume_table.txt > > Thanks in advance, > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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