Thanks so much Marie. I will check the toolboxes.
best,
Alan
On Wed, Jul 9, 2014 at 2:56 PM, Marie Schaer <marie.sch...@unige.ch> wrote:
>
> Hi Alan,
>
> You probably don't have the matlab image processing toolbox installed.
>
> Let me know if you can't install it easily.
>
> Best,
>
> Marie
>
> On Jul 9, 2014, at 11:51 AM, Alan Francis <alandarkene...@gmail.com>
> wrote:
>
> Hi Marie & FreeSurfers:
>
> I am running the LGI command on a group of brains and I am getting an
> error message. MATLAB opens up and begins to run when this error appears:
>
> < M A T L A B (R) >
> Copyright 1984-2011 The MathWorks, Inc.
> R2011b (7.13.0.564) 64-bit (maci64)
> August 13, 2011
>
>
> To get started, type one of these: helpwin, helpdesk, or demo.
> For product information, visit www.mathworks.com.
>
> >> reading filled volume...
> closing volume...
> {Undefined function 'fspecial' for input arguments of type 'char'.
>
> Error in make_outer_surface (line 31)
> Gaussian = fspecial('gaussian',[2 2],1);
> }
>
> I tried setting the environment using :
>
> setenv MATLABPATH /Applications/MATLAB_2011/bin
> setenv PATH ${MATLABPATH}/bin:${PATH}
>
> However this did not help. Any advice?
>
> thanks,
>
> Alan
>
>
>
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