hi Trang Within the Martinos center you would not need to update but just source a different version. The right one to source is /usr/local/freesurfer/nmr-dev-env
Maybe the right approach? Shantanu On Wed, July 9, 2014 4:57 pm, qtngu...@nmr.mgh.harvard.edu wrote: > Dear Freesurfer experts, > > I'm trying to run Tracula -prep after sourcing Freesurfer 5.3. The file > "<subjid>/dmri/dwi_motion.txt" is not included in the output. I then ran: > > trac-all -qa -c dmrirc > > and got the error message: flag -qa unrecognized > > Do you know what could have gone wrong? Do I have to download the updated > Tracula version from here: http://ftp.nmr.mgh.harvard.edu/fswiki/Tracula ? > > Thank you, > Trang > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > -- Shantanu Ghosh, Ph.D. Harvard Medical School & Massachusetts General Hospital Martinos Center for Biomedical Imaging -- Not only is the universe stranger than we think, it is stranger than we can think. -Werner Heisenberg _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
