Thanks Doug. On Aug 1, 2014 4:16 PM, "Douglas N Greve" <gr...@nmr.mgh.harvard.edu> wrote:
> > On 07/31/2014 03:16 PM, Mohammed Goryawala wrote: > > Hello All, > > > > I have some questions related to the qdec analysis I have run. > > > > 1. On running the qdec I see that FWHM is an input which changes > > cluster definition significantly. How would I choose the right FWHM > > for the analysis and can it be related to any imaging parameters? > There is no analytical answer to this question. It totally depends on > your data. > > > > 2. Secondly, on completion of the qdec analysis I want to export the > > clusters created by the qdec analysis into a volumetric file (which I > > can later convert to .nii). Please also suggest a way that would let > > me only export clusters above a particular size threshold. > You can use mri_label2vol inputting the annotation as the arg to the > --annot file. You can output it as a nii > doug > > > > Thank you very much in advance. > > > > Mohammed Goryawala > > Department of Radiology > > University of Miami, > > Miller School of Medicine > > > > > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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