Hi Tara try: recon-all -s <subject> -randomness -all Jon
________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Tara Miskovich <misko...@uwm.edu> Sent: Friday, August 22, 2014 12:07 PM To: Freesurfer support list Subject: [Freesurfer] LGI Topological Defect Hi all, I am getting an error that seems common for people running LGI where it crashes due to a topological defect. I have run mris_euler_number and everything looks fine. Plus, I went through each slice and made sure the surfaces looked good. Any advice on any other steps I can take? I have already tried rerunning recon-all. Thank you! Tara
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