I guess it should be dicom, I need to ask our colleagues who acquire the data. Are there any other requirements for input images if they are dicom? Thanks a lot!
2014-10-02 9:18 GMT-04:00 Bruce Fischl <fis...@nmr.mgh.harvard.edu>: > almost certainly yes. I assume they are dicom? > > On Thu, 2 Oct 2014, Svetlana Soloveva wrote: > > I see, thank you! In this case do you support the original MRIs if I can >> get >> them? It is my first time working with Freesurfer, so your input is very >> helpful. >> >> 2014-10-02 9:00 GMT-04:00 Bruce Fischl <fis...@nmr.mgh.harvard.edu>: >> I see. Sorry, I don't think we support it then >> >> Bruce >> On Thu, 2 Oct 2014, Svetlana Soloveva wrote: >> >> Hi Bruce, >> >> Thnaks! I think it is CTF MEG MRI file created by >> MRIConverter. >> >> 2014-10-02 8:35 GMT-04:00 Bruce Fischl >> <fis...@nmr.mgh.harvard.edu>: >> Hi Svetlana >> >> what format is *.mri? I don't think I've ever >> heard of it >> Bruce >> On Thu, 2 Oct 2014, Svetlana Soloveva wrote: >> >> Dear all, >> >> If I understand correctly, it is >> recommended to use >> original MRI files as an >> input. However, I have only *.mri file. >> First, I was >> able to run >> reconstruction following fieldtrip >> pipeline which >> includes some >> preprocessing of *.mri and writing >> resulting files >> in *.mgz format that can >> be used by Freesurfer. Is there any >> other way to >> work with *.mri files in >> Freesurfer without these preprocessing >> steps? >> >> Many thanks! >> >> Svetlana >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for >> the person to whom >> it is >> addressed. If you believe this e-mail was sent to >> you in error and the >> e-mail >> contains patient information, please contact the >> Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the >> e-mail was sent to you >> in error >> but does not contain patient information, please >> contact the sender >> and properly >> dispose of the e-mail. >> >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom >> it is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender >> and properly >> dispose of the e-mail. >> >> >> >> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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