You should ask the sys admin to create a directory for you on the shared
drive. If only root can write to it, that defeats the purpose of a
shared drive...
On 02/10/2015 08:21 AM, Kate Riggall wrote:
Hello,
I am trying to run a paired analysis (a two time-point longitudinal
analysis) on some subjects which have been longitudinally
pre-processed for me on another computer. The computer I am now
working on is originally a Windows computer, but is now running Linux
on a partition (CentOS Release 6.6, Kernel Linux 2.6, GNOME 2.28.2).
It has (apparently) 20.1 MiB of available disk space. My files are on
a SAMBA shared drive, which I have mounted to /home/user/Shared.
Now, I have created the first FSGD file with no issues, but when I
come to run mris_preproc I get one of three results, depending on
where I run it:
1) If I run it in /home/user/folder it runs for a while, but then I am
told
tee: lh.paired-diff.thickness.mris_preproc.log: No space left on device
and the output file is not created.
2) If I run it in the shared drive (in the same folder as the subject
data) I am told
mkdir: cannot create directory `./tmp.mris_preproc.11318': Permission
denied
ERROR: creating ./tmp.mris_preproc.11318
presumably because the shared folder belongs to the root user
3) If I run it in the shared drive using sudo mris_preproc etc. I am told
sudo: mris_preproc: command not found
I can't seem to find a way around this. I hope this makes sense, and
thanks in advance for your assistance.
Kind Regards,
Kate Riggall
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