I would like to view just the hippocampus in the aseg.mgz file overlaid with the brain.mgz. I created a custom lookup table by commenting all entries except 0 (Unknown) and 17 (Left-Hippocampus). See below for a snippet of the lookup table. When I load this LookUp table I see numerous structures (7, 8, 10, 12, 13, 14, 41, 47, 51) all labeled with various shades of yellow. Any idea why this is happening? What am I doing wrong?
Bob #No. Label Name: R G B A # 0 Unknown 0 0 0 0 ... # 16 Brain-Stem 119 159 176 0 17 Left-Hippocampus 220 216 20 0 # 18 Left-Amygdala … _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
