Hi Freesurfer experts I am always a little confused with the registration matrices from tracula output. If we need to have the DTI maps like dtifit_MD.nii.gz in the recon space, do we use the matrix anatorig2diff.bbr.dat?
mri_vol2vol --mov /<recon>/dmri/dtifit_MD.nii.gz --targ /<recon>/mri/brainmask.mgz --reg /<recon>/dmri/xfms/anatorig2diff.bbr.dat --o <recon>/mri/dtifit_MD_registered.nii.gz Thanks a lot Celine _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
