Awesome that you guys are working a parcellation! In the meantime, if I wanted to try to use the atlases you suggested, how would I go about processing the data? Is there documentation I can follow?
Thanks so much, Mia ________________________________ From: MCLAREN, Donald [mclaren.don...@gmail.com] Sent: Tuesday, August 04, 2015 9:36 AM To: Borzello, Mia Subject: Re: [Freesurfer] registering NHP data Mia, You could use the 112RM-SL atlas for normalization and then use the Saleem-Logothetis Atlas for localization. Hopefully, by August, we'll have a parcellation on the the MR image so that localization can be done automatically. Best Regards, Donald McLaren, PhD On Mon, Aug 3, 2015 at 2:01 PM, Borzello, Mia <mborze...@partners.org<mailto:mborze...@partners.org>> wrote: Hi Freesurfer experts, Does Freesurfer have a separate pipeline for registering NHP data? I am trying to register macaque data and localize the implanted electrodes, but the normal protocol errored. I did a google search and found this- is this what I should be using?: https://surfer.nmr.mgh.harvard.edu/fswiki/MonkeyData I downloaded the scripts but I'm not sure what commands I'm supposed to be running, etc. Any guidance you can give would be must appreciated! Thanks, m _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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