Thanks! One complication I'm seeing is that when I uncompress, say, an .mgz file, the old subject number is still embedded in some text near the end of the file*. Since we want to change these ID numbers for de-identification purposes, we'd need to change them there, too.
Is there a way to either strip those things or edit them? Thanks! -Nate * For example: P/studies/STUDY/DATA/mri/processed/freesurfer/IDENTIFIER/mri/transforms/talairach.xfm UNKNOWN @AutoAlign 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 mri_convert /studies/STUDY/DATA/mri/processed/IDENTIFIER/anat/T1High_native1.nii /studies/STUDY/DATA/mri/processed/freesurfer/IDENTIFIER/mri/orig/001.mgz ProgramVersion: $Name: stable5 $ TimeStamp: 2014/08/25-21:51:59-GMT BuildTimeStamp: May 13 2013 16:24:28 CVS: $Id: mri_convert.c,v 1.179.2.7 2012/09/05 21:55:16 mreuter Exp $ User: USER Machine: MACHINE Platform: Linux PlatformVersion: 2.6.32-431.20.3.el6.x86_64 CompilerName: GCC CompilerVersion: 40400 mri_convert /studies/STUDY/DATA/mri/processed/freesurfer/IDENTIFIER/mri/rawavg.mgz /studies/STUDY/DATA/mri/processed/freesurfer/IDENTIFIER/mri/orig.mgz --conform ProgramVersion: $Name: stable5 $ TimeStamp: 2014/08/25-21:54:39-GMT BuildTimeStamp: May 13 2013 16:24:28 CVS: $Id: mri_convert.c,v 1.179.2.7 2012/09/05 21:55:16 mreuter Exp $ User: USER Machine: MACHINE Platform: Linux PlatformVersion: 2.6.32-431.20.3.el6.x86_64 CompilerName: GCC CompilerVersion: 40400 On Mon, Aug 3, 2015 at 12:03 PM Douglas N Greve <gr...@nmr.mgh.harvard.edu> wrote: > I think that should work without problem. > > On 08/03/2015 12:51 PM, Nate Vack wrote: > > Hi all, > > > > We're looking to change the ID system we're using for some freesurfer > > data. Will doing do be as simple as renaming our single-subject data > > directories and restarting analysis from that point, or would we need > > to do something more complicated? > > > > Many thanks, > > -Nate > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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