Hi Bruce,
I send you a screenshot of my command field with my command line and the following error message.
Thank you very much for your help.
Carina
Gesendet: Dienstag, 11. August 2015 um 16:54 Uhr
Von: "Bruce Fischl" <fis...@nmr.mgh.harvard.edu>
An: "Freesurfer support list" <freesurfer@nmr.mgh.harvard.edu>
Betreff: Re: [Freesurfer] uploading a surface in freeview
Von: "Bruce Fischl" <fis...@nmr.mgh.harvard.edu>
An: "Freesurfer support list" <freesurfer@nmr.mgh.harvard.edu>
Betreff: Re: [Freesurfer] uploading a surface in freeview
Hi Carina you need to send us your full command line and screen output otherwise we don't have enough information to help you. cheers Bruce On Tue, 11 Aug 2015, car...@van-vlodrop.de wrote: > Hi Bruce, > Thank you for your answer. > When I type the path to the surface with the beginning and endling you told > me, freeview opens with the error message 'failed to load surface' and in > the command field it says 'MRISread failed'. > Do you have any idea of how it is possible to avoid this error? > > Best regards, Carina > Gesendet: Sonntag, 09. August 2015 um 16:33 Uhr Von: "Bruce Fischl" > An: "Freesurfer support list" > Betreff: Re: [Freesurfer] uploading a > surface in freeview > Hi Carina it should be something like: freeview -f > /lh.inflated:overlay=mc-z.abs.2.sig.cluster.mgh assuming > mc-z.abs.2.sig.cluster.mgh is in your current directory cheers Bruce On Sun, > 9 Aug 2015, car...@van-vlodrop.de wrote: > Hi Lilla, > I still have the > problem to display my surface created by the Monte Carlo > analysis. > There > are several files generated and I think that > 'mc-z.abs.2.sig.cluster.mgh' > should be the correct one to show the overlay > in freeview. > Could you > please tell me which complete command I have to type in after > opening > freesurfer? > > Thank you very much. > Best regards, Carina > > Gesendet: Mittwoch, 16. Juli 2014 um 14:01 Uhr Von: "Lilla Zollei" > > An: "Freesurfer support list" > Betreff: Re: [Freesurfer] uploading a > > surface in freeview > Hi Carina, You can use the -f option (instead of -v > used for volumes) when > you are calling freeview from the commandline in > order to display a surface > and then append :overlay=overlay_filename after > the filename to identify the > overlay that you want to use. You will need > to decide which hemi and which > surface you want to use and type the full > path to it and the same with the > overlay. Lilla On Wed, 16 Jul 2014, > car...@van-vlodrop.de wrote: > Dear > Freesurfer experts, > I have already > run a Monte Carlo Simulation and I > would like to upload the results in > freeview. The simulation created a file > ending with .mgh and the tutorial > identifies it to be the overlay. Do I have > to upload a surface first and > afterwards the overlay? How can I upload a > surface and which is the right > one? > > Yours sincerely, > Carina > > > > >_______________________________________________ Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information > > in this e-mail is intended only for the person to whom it is addressed. If > > you believe this e-mail was sent to you in error and the e-mail contains > > patient information, please contact the Partners Compliance HelpLine at > > http://www.partners.org/complianceline . If the e-mail was sent to you in > > error but does not contain patient information, please contact the sender > > and properly dispose of the e-mail. > > >_______________________________________________ Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information > in this e-mail is intended only for the person to whom it is addressed. If > you believe this e-mail was sent to you in error and the e-mail contains > patient information, please contact the Partners Compliance HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error but does not contain patient information, please contact the sender > and properly dispose of the e-mail. > >_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
