Hi Douglas, Thanks for the help! However, when I tried the --nofixmni flag, all the ROIs appeared to have identical MNI coordinates. I have pasted the output from 3 ROIS in the LH.
# ClusterNo Max VtxMax Size(mm^2) MNIX MNIY MNIZ NVtxs 1 3.332 83949 82219.39 -29.4 -22.0 17.4 163842 1 3.533 117158 82219.39 -29.4 -22.0 17.4 163842 1 3.170 83424 82219.39 -29.4 -22.0 17.4 163842 The same thing happens to the ROIs on the RH (XYZ: 29.8 29.8 18.0). Best Wishes, Elijah -- Elijah Mak, Gates Scholar PhD Candidate *|* Psychiatry University of Cambridge Trinity College, Cambridge, CB2 1TQ
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