No, QDEC is a very limited tool. You'll have to use the command line
(mri_glmfit-sim). Also, you'll need to register each of your subjects to
the new atlas (surfreg), then specify the average subject AND the new
registration when running mris_preproc to create a new y.mgh file. None
of this can be done in qdec.
doug
On 8/27/15 10:21 AM, Kai Jannusch wrote:
Dear all,
During my analysis for pial_lgi instead of using fsaverage I prepared
my own average surface using make_average and recon-all qcache. Now, I
want to correct the results for multiple comparisons using Monte Carlo
Null-Z simulation in Qdec. However, when I use my own average as
common-space subject it doesn´t work.
My proceeding:
preparation of my own average: make_average and recon-all qcache
run a parallelized Monte Carlo simulation for all subjects separated
in 10 spaces: mri_mcsim
merge the outputs of the simulation in two mc-z.cdf (one for each
hemisphere) files
Is there a command that Qdec can use the new Monte Carlo files for my
dataset?
If not. Is there a possibility to run a Monte Carlo correction with my
dataset?
Thanks for your ideas!
KJ, CJ
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