Hi all, I would like to take a single subject's freesurfer directory and apply a single linear transform (I already have the .dat file I would like to use) to all of the recon-all output (volumes, surfaces, label files, etc). Essentially I would like to apply the transform and make a new freesurfer directory that keeps as much of the same contents as possible. The transform is not just rigid-body, it includes scaling and skewing.
Is there a suggested way to do this, either all-at-once or piece-by-piece? Thank you very much, David
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