My platform is centOS6.4 final 64bit. 3dvolreg.afni still works when I used FSv5.3. but when I update to FSv.6, I cannot use the 3dvolreg.afni.
2015-12-24 4:29 GMT+07:00 Douglas Greve <gr...@nmr.mgh.harvard.edu>: > what is your platform? Do you have AFNI installed and does it work? If so, > you can copy the 3dvolreg to 3dvolreg.afni and it should work. > > > On 12/23/15 1:22 AM, Thục Trinh wrote: > > Hi, > It comes up with this error: > /freesurfer/bin/3dvolreg.afni: Exec format error. Wrong Architecture. > ERROR: 3dvolreg.afni > Invalid null command. > > 2015-12-23 7:59 GMT+07:00 Douglas Greve <gr...@nmr.mgh.harvard.edu>: > >> Try this one >> >> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/3dvolreg.afni >> >> On 12/22/15 7:56 PM, Thục Trinh wrote: >> >> The link is fine. But when I click on the 3dvolreg file to get the >> download, it failed with the error: "this webpage is not available" >> >> 2015-12-22 23:12 GMT+07:00 Douglas Greve < <gr...@nmr.mgh.harvard.edu> >> gr...@nmr.mgh.harvard.edu>: >> >>> what happens when you click on it? >>> >>> >>> On 12/22/15 9:28 AM, Thục Trinh wrote: >>> >>> Hi Douglas, >>> It still does not work. >>> >>> 2015-12-21 23:29 GMT+07:00 Douglas N Greve < <gr...@nmr.mgh.harvard.edu> >>> gr...@nmr.mgh.harvard.edu>: >>> >>>> that link works for me. Can you try again? >>>> >>>> On 12/20/2015 02:17 AM, Thục Trinh wrote: >>>> > Hi FS experts, >>>> > >>>> > I'm working on my fMRI data using FSFAST v.6 tool. But the first step >>>> > of Preproc-sess was failed with an error :" *ERROR: cannot find AFNI >>>> > command 3dvolreg.afni ". * >>>> > I found a thread that had the same error with mine (in FS v.5.3) : >>>> > >>>> http://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg37764.html >>>> > >>>> > But the link to download 3dvolreg.afni doesn't work. Is this the same >>>> > 3dvolreg.afni for v.5.3 and v.6? >>>> > >>>> > Thanks, >>>> > Trinh >>>> > >>>> > >>>> > >>>> > >>>> > _______________________________________________ >>>> > Freesurfer mailing list >>>> > Freesurfer@nmr.mgh.harvard.edu >>>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>>> >>>> -- >>>> Douglas N. Greve, Ph.D. >>>> MGH-NMR Center >>>> gr...@nmr.mgh.harvard.edu >>>> Phone Number: 617-724-2358 >>>> Fax: 617-726-7422 >>>> >>>> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >>>> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >>>> www.nmr.mgh.harvard.edu/facility/filedrop/index.html >>>> Outgoing: >>>> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >>>> >>>> _______________________________________________ >>>> Freesurfer mailing list >>>> Freesurfer@nmr.mgh.harvard.edu >>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>>> >>>> >>>> The information in this e-mail is intended only for the person to whom >>>> it is >>>> addressed. If you believe this e-mail was sent to you in error and the >>>> e-mail >>>> contains patient information, please contact the Partners Compliance >>>> HelpLine at >>>> http://www.partners.org/complianceline . If the e-mail was sent to you >>>> in error >>>> but does not contain patient information, please contact the sender and >>>> properly >>>> dispose of the e-mail. >>>> >>> >>> >>> >>> _______________________________________________ >>> Freesurfer mailing >>> listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> The information in this e-mail is intended only for the person to whom >>> it is >>> addressed. If you believe this e-mail was sent to you in error and the >>> e-mail >>> contains patient information, please contact the Partners Compliance >>> HelpLine at >>> http://www.partners.org/complianceline . If the e-mail was sent to you >>> in error >>> but does not contain patient information, please contact the sender and >>> properly >>> dispose of the e-mail. >>> >>> >> >> >> _______________________________________________ >> Freesurfer mailing >> listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> >> > > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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