On 01/28/2016 01:11 PM, Shady El Damaty wrote:
> Hi,
>
> I was curious to know what the tentative release date for FreeSurfer 6 is.  
> I’m currently running FreeSurfer on multiple machines with El Capitan 
> installed and I’m wondering whether it’s worth installing the beta 
> distribution or rather uninstalling SIP on each of these many machines.
>

The release date for FreeSurfer 6 has been hard to nail down but we are 
in the final stages. I hesitate to give a solid date but I would say a 
month is a fair estimate.


> Also is there any documentation on any specific bugs to watch out for with El 
> Capitan and FreeSurfer 5.3?  I’ve been running some functions and haven’t 
> found any errors yet.
>

I would only expect you to encounter errors if you were calling scripts 
which call freesurfer binaries (e.g. recon-all). If your just calling 
the binaries themselves then those should run successfully.

>
> PS - how does FreeSurfer 6 plan to get around SIP?

We plan on getting around it using two methods. 1) creating wrapper 
scripts for some binaries. 2) Adding a source file in existing scripts 
to recreate the library path that were stripped by SIP.

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