I used tksurfer… I found the error actually it was due to the order by which I load the data into freeview. It has to be loading the ROI first and then loading the volume along with the associated registry. When this order is violated all sorts of problems happen.
On the other hand, I am unable to change the values in the textbox for "configure phase encoded data display" window in tksurfer. The keyboard just won’t type anything. Is there a way around that? I cannot use freeview for labelling coz I do it on flattened patches that don’t open there. Thank you, Sent from Mail for Windows 10 From: Bruce Fischl Sent: Friday, February 5, 2016 10:55 AM To: Freesurfer support list Subject: Re: [Freesurfer] Template for mri_label2vol how were the labels made? On Fri, 5 Feb 2016, m.abouelya...@gmail.com wrote: > > Dear all, > > > > I am wondering about the template that I should use for use to convert custom > made labels to > volumes. I have used the template.nii.gz file that gets generated in the fMRI > analysis folder > corresponding to the same subject along with the register.dat file located in > the same > location. > > However, when I viewed the resulting volume and label in freeview they don’t > seem to overlap > correctly. > > > > Did anyone have success in converting custom labels to volumes? > > > > Thank you, > > > > > > > > > > > > >
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