Dear FreeSurfer experts, I hava a question regarding rerunning the recon-process. I have cases where I do manual edits on a brain and only set a few control points on one hemisphere but white matter edits on the other. I would then run the -cp flag for one hemisphere and the -wm flag for the other. My question is, can that happen simultaneously, i.e. in different terminals or should I do one after the other because of some sort of interferences?
Also, I was wondering if it is possible to save surfaces from a BASE under a different name, run the recon-process again and compare the new surfaces with the old ones and then pick, if they are better, the old ones to go on to calculate the LONGs? Thanks, Clara _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
