Hi Doug, Thanks for your response. What I'm trying to do is to get each voxel's times course in structural space and I was under the impression that mri_vol2vol --mov func.nii would be the right way to go. Would you please let me know what the best way would be to do this?
best, Ehsan,. On Wed, Mar 16, 2016 at 11:27 PM, Douglas Greve <gr...@nmr.mgh.harvard.edu> wrote: > that's going to create a pretty big volume as it will map your functional > time course to a 256^3 float volume. If you have 100 time points, then that > will be about 7G. > > On 3/16/16 3:27 PM, Ehsan Tadayon wrote: > > Hi Bruce, > > Thanks for your response. I'm using : > > freesurfer version: freesurfer-Darwin-leopard-i686-stable-pub-v5.1.0 on OS > X Yosemite 10.10.5 with 16 GB 1333 MHz DDR3 memory. The command that I'm > using: > > mri_vol2vol --mov func.nii.gz --fstarg --reg register.dat --o > func.anat.nii.gz > > Thanks in advance for your help. > > best regards, > Ehsan. > > > > > On Tue, Mar 15, 2016 at 11:49 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu > > wrote: > >> Hi Ehsan >> >> We need the full command line and screen output and also what your >> hardware and software environments are to help you. Certainly sounds like >> you ran out of memory though >> >> Cheers >> Bruce >> >> > On Mar 15, 2016, at 11:41 PM, Ehsan Tadayon < >> <ehsan.tadayo...@gmail.com>ehsan.tadayo...@gmail.com> wrote: >> > >> > Ehsan >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> >> > > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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