Hi Anastasia, Thank you for your answer. There aren't stats/*.path.mean.txt files and terminal says 'Could not read /Applications/freesurfer/subjects/cvs_avg35.' I checked /Application/freesurfer/subjects/cvs_avg35 folder and couldn't find COR-.info file. Could you tell me any resolutions, please?
Thanks, Anri ********************************************************************** 京都府立医科大学附属病院 精神科・心療内科 渡辺 杏里 ********************************************************************** Anri WATANABE, M.D. Department of Psychiatry, University Hospital, Kyoto Prefectural University of Medicine ********************************************************************** 2016-05-21 6:48 GMT+09:00 Anastasia Yendiki <[email protected]>: > > Hi Anri - The FA values are extracted in the native space of each subject, > which is why those are the only coordinates that you see. If you want to > display the results of your analysis on an average path, after running > trac-all -stat, you can use the stats/*.path.mean.txt files (see also the > last part of the TRACULA tutorial). > > Best, > a.y > > > On Wed, 18 May 2016, Anri WATANABE wrote: > > Dear experts, >> I use TRACULA to examine a measure (FA) at each voxel in one pathway. >> pathstats.byvoxel.txt files show coordinates in native space and after >> converting those the new files don't show any coordinates which are in MNI >> space. >> Could you tell me how can I know MNI coordinate values? >> >> Thank you! >> >> >> Regards, >> Anri >> >> >> >> ********************************************************************** >> 京都府立医科大学附属病院 >> 精神科・心療内科 >> 渡辺 杏里 >> ********************************************************************** >> Anri WATANABE, M.D. >> Department of Psychiatry, >> University Hospital, Kyoto Prefectural University of Medicine >> ********************************************************************** >> >> > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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