Hi Trisanna

you don't need to inflate the overlays. They can just use the existing surface-based (sphere.reg) registration.

cheers
Bruce
On Wed, 15 Jun 2016, Trisanna Sprung-Much wrote:

Hi there
So I have sulcal labels from another software (.mnc format) from which I am 
trying to generate some probability maps. I was able
to convert the .mnc to .mgz surface overlay using mri_vol2surf for my MRIs 
after running all MRIs in recon-all. So, now I have
all my painted voxels as surface overlays, as I was instructed to do a few 
months ago.

I was told that the next step would be to use mri_surf2surf to resample the 
overlays to fsaverage. 

I am a bit confused as I would think that the next step would be to take the 
surface overlays and inflate them before I register
them to fsaverage. I see that when recon-all runs, it computes the registration 
of the MRI surface to fsaverage and saves it as
sphere.reg. Is there a way I can inflate my surface overlays in a similar 
manner and then apply this same registration to my
surface overlays? Or am I missing something?

thanks very much!

Trisanna


--
Ph.D. CandidateMcGill University
Integrated Program in Neuroscience
Psychology



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