Hopefully soon, as several people have asked for it, but I don't have a concrete date unfortunately.
On Wed, 27 Jul 2016, Barbara Kreilkamp wrote: > Dear Anastasia, > > Thank you that is great! Do you know yet when it will be available? > > Best wishes, > > Barbara > > > On 27/07/2016 06:25, Anastasia Yendiki wrote: >> Hi Barbara - We're working on a new atlas for TRACULA that will include >> the fornix. We've already done the manual labeling for it. >> >> Best, >> >> a.y >> >> On Mon, 25 Jul 2016, Barbara Kreilkamp wrote: >> >>> Dear Anastasia, >>> >>> As we are analyzing DTI data acquired in patients with epilepsy we are >>> especially interested in the fornix. >>> I've come across the mri_cc -f option for fornix segmentation (native space) >>> but I've also read that manual tracing/labeling of the tracts would be >>> needed in the 33 controls for TRACULA (training set - trctrain). >>> In Wakana et al. 2011 I see that the fornix was not included due to low >>> reproducibility and it further states: >>> >>> "the reason for the poor reproducibility is most likely due to not enough >>> spatial resolution with respect to the diameter" >>> >>> I wonder if you could please guide us in how to best add this tract to >>> TRACULA so that it would be consistent in the methods compared with the >>> other tract ROI definitions or perhaps state what were the difficulties in >>> adding this particular tract to TRACULA. >>> >>> Thank you very much, >>> Best wishes, >>> Barbara >>> >>> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it is >> addressed. If you believe this e-mail was sent to you in error and the e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you in >> error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
