Anyone? Cheers, Sabin Khadka
On Fri, Jul 29, 2016 at 2:47 PM, Sabin Khadka <mr.sabinkha...@gmail.com> wrote: > Hi Doug, I tried to pick up from the thread below to get MNI coordinates > of each destrieux parcellation region. > > > > https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2013-July/032037.html > > I created label files from > mri_annotation2label --subject fsaverage --hemi lh(/rh) --annotation > aparc.a2009s --outdir label_destrieux # which works fine > > And I tried to get the coordinates of each labels using > > mri_surfcluster --in ~/subjects/fsaverage/surf/lh.thickness --clabel > <label file> --sum <output file> --centroid --thmin 0 > --hemi lh --subject fsaverage > > But, all left labels would produce the same coordinates and so does right > labels. (I've attached few example files here with). Also, it says TalX, > TalY, TalZ are these coordinates in MNI or Talairach? > > Thanks for help. >
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