Dear FS experts,
I need to crate a mask for whole white matter in the brain including the cerebellum. Also I need a mask for the whoe gray matter.
Can I binzarize ( i.e. use mri_binarize) and input the files:
 
wm.seg.mgz from the output of recon-all to create a a mask for global white matter
and the file ribbon.mgz the output of recon-all to create a a mask for global gray matter
 
Thank you for any advice!
 
Bests,
John Anderson

Senior Research Associate
Psychological and Brain Sciences Dept.
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834
Fax: +1 (603) 646-1419
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to