I think that would be ok, but an easy way to test it is to try it on another subject first with their actual wm.mgz, then with the one from fsaverage to check that the thickness is the same.
cheers Bruce On Sun, 11 Sep 2016, Arkadiy Maksimovskiy wrote: > Dear Freesurfer Experts, > > I am trying to run mris_anatomical_stats in order to extra thickness data > from my participants' label files. However, I only have access to a > subj_recon data (without wm.mgz in that > folder). > > Does anyone know if there is a way to extract the thickness measures for > every participant's label, without having the wm.mgz file? Would it be okay > to copy that file from > fsaverage, in order ot bypass this issue, or would that mess up the > calculations of the thickness of the participants' labels? > > Thank you in advance for your help, > > Arkadiy > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
