Doug- I did try mris_convert -o $SUBJECTS_DIR/FSsub/surf/lh.white $SUBJECTS_DIR/sub/REST/bold/001/fmcpr.odd.sm5.fsaverage.lh.nii.gz fmcpr.lh.gifit-file.gii
I still get freadFloat: frear failed error. On separate note: Is is possible to convert these FSFAST generated files (fmcpr.odd.sm5.fsaverage.?h.nii.gz and fmcpr.odd.sm5.mni305.2mm.nii.gz) into CIFTI format? -Sabin On Tue, Sep 13, 2016 at 3:09 PM Sabin Khadka <mr.sabinkha...@gmail.com> wrote: > Hi Doug- I did try > mris_convert -o $SUBJECTS_DIR/FSsub/surf/lh.white > $SUBJECTS_DIR/sub/REST/bold/001/fmcpr.odd.sm5.fsaverage.lh.nii.gz > fmcpr.lh.gifit-file.gii > > I still get freadFloat: frear failed error. > > Cheers, > Sabin Khadka > > On Tue, Sep 13, 2016 at 2:53 PM, Douglas N Greve < > gr...@nmr.mgh.harvard.edu> wrote: > >> what is your mris_convert command line? You need to include vertex >> position information (eg, -o lh.white) >> >> >> On 09/12/2016 03:32 PM, Sabin Khadka wrote: >> > Hi all, >> > >> > Is there a way to convert FSFAST files >> > (fmcpr.odd.sm5.fsaverage.?h.nii.gz) files to convert into gifti >> > format? I've tried mris_convert but it does not work. >> > >> > Thanks for help. >> > >> > Cheers, >> > Sabin Khadka >> > >> > >> > _______________________________________________ >> > Freesurfer mailing list >> > Freesurfer@nmr.mgh.harvard.edu >> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> -- >> Douglas N. Greve, Ph.D. >> MGH-NMR Center >> gr...@nmr.mgh.harvard.edu >> Phone Number: 617-724-2358 >> Fax: 617-726-7422 >> >> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >> www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> >> >
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
