https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI

this does not have the mri_glmfit command, but that is the same doing the voxel-wise stats with the change in --y. This does not include correction for ICV


On 10/18/16 10:53 AM, miracle ozzoude wrote:
hello doug,
Thanks for the response. Please can you send me the link. Also, does GLM correct for total intracranial volume or do I need to create fsgd file with total intracranial volume as covariate? Thanks

On Tue, Oct 18, 2016 at 10:48 AM, Douglas Greve <gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> wrote:

    do you mean volumes of ROIs? Yes, there is a tutorial on this in
    our wiki, but basically you need to run aparcstats2table and/or
    asegstats2table to create a table of volumes for each subject and
    ROI. Then use mrI_glmfit with the --table option instead of --y


    On 10/18/16 10:18 AM, miracle ozzoude wrote:
    Hello Expert,
    Is there are way to perform glm analysis on cortical and
    subcortical volumes. Thanks
    Best,.
    Paul


    _______________________________________________
    Freesurfer mailing list
    Freesurfer@nmr.mgh.harvard.edu
    <mailto:Freesurfer@nmr.mgh.harvard.edu>
    https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
    <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
    _______________________________________________ Freesurfer mailing
    list Freesurfer@nmr.mgh.harvard.edu
    <mailto:Freesurfer@nmr.mgh.harvard.edu>
    https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
    <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> The
    information in this e-mail is intended only for the person to whom
    it is addressed. If you believe this e-mail was sent to you in
    error and the e-mail contains patient information, please contact
    the Partners Compliance HelpLine at
    http://www.partners.org/complianceline
    <http://www.partners.org/complianceline> . If the e-mail was sent
    to you in error but does not contain patient information, please
contact the sender and properly dispose of the e-mail.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to