try this version https://gate.nmr.mgh.harvard.edu/safelinks/greve/mri_binarize
On 11/02/2016 12:37 PM, HOSSU Gabriela wrote: > > Hello everyone, > > I am trying to run a mri_binarize command on FS v 5.2, Linux 64bit, > but when I use the option —gm (also for –subcort-gm). > > I am getting an error that says the —gm option is not recognized. > > Here is the command line and the following error (from the mri folder > of a subject): > > mri_binarize –i aparc+aseg.mgz –gm –o gmmask.mgz > > I obtain this: > > ERROR: Option –gm unknown > > Thanks very much, > > Gabriela HOSSU > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
