hi freesufer folks, has your new version 6 run a successful cuda7.5 gpu on
ubuntu 16.04? i'm getting a core dump. jeff
here is the cmd:
recon-all -all -use-gpu -s ${filenames_arr[$i]}_freesurf -i
${sesnum_arr[$i]}/anat/${filenames_arr[$i]}.nii
first output gave:
Testing for CUDA device:
/home/toddr/Software/freesurfer/bin/mri_em_register_cuda: error while loading
shared libraries: libcudart.so.5.0: cannot open shared object file: No such
file or directory
Linux redshirt 4.4.0-59-generic #80-Ubuntu SMP Fri Jan 6 17:47:47 UTC 2017
x86_64 x86_64 x86_64 GNU/Linux
thinking its a missing link i did:
sudo ln -s /usr/lib/x86_64-linux-gnu/libcudart.so.7.5.18
/usr/lib/x86_64-linux-gnu/libcudart.so.5.0
and then got:
Testing for CUDA device:
nvcc: NVIDIA (R) Cuda compiler driver
Copyright (c) 2005-2012 NVIDIA Corporation
Built on Fri_Sep_21_17:28:58_PDT_2012
Cuda compilation tools, release 5.0, V0.2.1221
Driver : 8.0
Runtime : 7.50
Acquiring CUDA device
Using default device
CUDA device: GeForce GTX TITAN Black
Segmentation fault (core dumped)
Linux redshirt 4.4.0-59-generic #80-Ubuntu SMP Fri Jan 6 17:47:47 UTC 2017
x86_64 x86_64 x86_64 GNU/Linux
recon-all -s sub-bbc101_ses-1_mpr_3_freesurf exited with ERRORS at Tue Jan 24
13:21:33 PST 2017
For more details, see the log file
To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
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