Hello Freesurfer experts,
>From your wiki page, I understand how to normalize volumes in subject
>diffusion space to the CVS template:
mri_vol2vol --targ $FREESURFER_HOME/subjects/cvs_avg35/mri/norm.mgz \
--m3z
$SUBJECTS_DIR/$subj/cvs/combined_tocvs_avg35_elreg_afteraseg-norm.m3z \
--noDefM3zPath --reg $TUTORIAL_DIR/$subj/dtrecon/register.dat \
--mov fa-masked.mgz \
--o fa-masked.ANAT+CVS-to-avg35.mgz \
--interp trilin --no-save-reg
However, how would one take take a volume in CVS template space and reverse
normalize it back to subject diffusion space? Is this possible? If so, what
would that command look like and what other steps would be necessary to get the
required inputs?
Thanks,
Doug
Douglas Merkitch
Neurological Sciences
Rush University Medical Center
Email: douglas_merki...@rush.edu<mailto:douglas_merki...@rush.edu>
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