Hi Mehul
yes, if you are using it you should always include it on the recon-all
command line
cheers
Bruce
On Sun, 5 Feb 2017, Mehul Sampat wrote:
Hi Folks,
I have a question about the usage of the -bigventricles flag in FS 5.3.
1. Suppose i run recon-all with -bigventricles option.
2. Then i add control points and run recon-all with the -autorecon2-cp as
described in the recon-all
help.
USAGE: recon-all
3. The recon-all help mentions "-autorecon2-cp : process stages 12-23 (uses -f
w/ mri_normalize, -keep
w/ mri_seg"
My question is: when i run recon-all the second time with the -autorecon2-cp
flag, do i need to include
the -bigventricles option again ?
In general, if the first round of processing used -bigventricles, should it be
always used if recon-all
is re-run after making edits ?
Thanks
Mehul
ps: can you believe the Patriots won SB51 !! :-)
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
